Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdx4 | Chic1 | MGP_SPRETEiJ_P0096173 | MGP_SPRETEiJ_P0096174 | Caudal type homeobox 4. | Cysteine-rich hydrophobic domain 1. | 0.616 |
Chic1 | Cdx4 | MGP_SPRETEiJ_P0096174 | MGP_SPRETEiJ_P0096173 | Cysteine-rich hydrophobic domain 1. | Caudal type homeobox 4. | 0.616 |
Chic1 | Dlg3 | MGP_SPRETEiJ_P0096174 | MGP_SPRETEiJ_P0096039 | Cysteine-rich hydrophobic domain 1. | Discs large MAGUK scaffold protein 3. | 0.436 |
Chic1 | Nexmif | MGP_SPRETEiJ_P0096174 | MGP_SPRETEiJ_P0096185 | Cysteine-rich hydrophobic domain 1. | Neurite extension and migration factor. | 0.493 |
Chic1 | Ociad2 | MGP_SPRETEiJ_P0096174 | MGP_SPRETEiJ_P0071255 | Cysteine-rich hydrophobic domain 1. | OCIA domain containing 2. | 0.511 |
Chic1 | Rlim | MGP_SPRETEiJ_P0096174 | MGP_SPRETEiJ_P0096181 | Cysteine-rich hydrophobic domain 1. | Ring finger protein, LIM domain interacting. | 0.613 |
Chic1 | Tsx | MGP_SPRETEiJ_P0096174 | MGP_SPRETEiJ_P0096175 | Cysteine-rich hydrophobic domain 1. | Testis specific X-linked gene. | 0.614 |
Chic1 | Wasf3 | MGP_SPRETEiJ_P0096174 | MGP_SPRETEiJ_P0075009 | Cysteine-rich hydrophobic domain 1. | WAS protein family, member 3. | 0.456 |
Chic1 | Zcchc13 | MGP_SPRETEiJ_P0096174 | MGP_SPRETEiJ_P0096177 | Cysteine-rich hydrophobic domain 1. | Zinc finger, CCHC domain containing 13. | 0.516 |
Dlg3 | Chic1 | MGP_SPRETEiJ_P0096039 | MGP_SPRETEiJ_P0096174 | Discs large MAGUK scaffold protein 3. | Cysteine-rich hydrophobic domain 1. | 0.436 |
Dlg3 | Wasf3 | MGP_SPRETEiJ_P0096039 | MGP_SPRETEiJ_P0075009 | Discs large MAGUK scaffold protein 3. | WAS protein family, member 3. | 0.471 |
Nexmif | Chic1 | MGP_SPRETEiJ_P0096185 | MGP_SPRETEiJ_P0096174 | Neurite extension and migration factor. | Cysteine-rich hydrophobic domain 1. | 0.493 |
Nexmif | Rlim | MGP_SPRETEiJ_P0096185 | MGP_SPRETEiJ_P0096181 | Neurite extension and migration factor. | Ring finger protein, LIM domain interacting. | 0.541 |
Ociad2 | Chic1 | MGP_SPRETEiJ_P0071255 | MGP_SPRETEiJ_P0096174 | OCIA domain containing 2. | Cysteine-rich hydrophobic domain 1. | 0.511 |
Rlim | Chic1 | MGP_SPRETEiJ_P0096181 | MGP_SPRETEiJ_P0096174 | Ring finger protein, LIM domain interacting. | Cysteine-rich hydrophobic domain 1. | 0.613 |
Rlim | Nexmif | MGP_SPRETEiJ_P0096181 | MGP_SPRETEiJ_P0096185 | Ring finger protein, LIM domain interacting. | Neurite extension and migration factor. | 0.541 |
Rlim | Tsx | MGP_SPRETEiJ_P0096181 | MGP_SPRETEiJ_P0096175 | Ring finger protein, LIM domain interacting. | Testis specific X-linked gene. | 0.403 |
Tsx | Chic1 | MGP_SPRETEiJ_P0096175 | MGP_SPRETEiJ_P0096174 | Testis specific X-linked gene. | Cysteine-rich hydrophobic domain 1. | 0.614 |
Tsx | Rlim | MGP_SPRETEiJ_P0096175 | MGP_SPRETEiJ_P0096181 | Testis specific X-linked gene. | Ring finger protein, LIM domain interacting. | 0.403 |
Tsx | Zcchc13 | MGP_SPRETEiJ_P0096175 | MGP_SPRETEiJ_P0096177 | Testis specific X-linked gene. | Zinc finger, CCHC domain containing 13. | 0.478 |
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