Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NagA_2 | SDK96191.1 | SAMN05192578_10540 | SAMN05192578_101542 | Predicted dehydrogenase. | Putative collagen-binding domain of a collagenase. | 0.526 |
NagA_2 | SDL58529.1 | SAMN05192578_10540 | SAMN05192578_10539 | Predicted dehydrogenase. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.917 |
SDK96191.1 | NagA_2 | SAMN05192578_101542 | SAMN05192578_10540 | Putative collagen-binding domain of a collagenase. | Predicted dehydrogenase. | 0.526 |
SDK96191.1 | SDK99660.1 | SAMN05192578_101542 | SAMN05192578_101751 | Putative collagen-binding domain of a collagenase. | Thioredoxin-like. | 0.753 |
SDK96191.1 | SDL05089.1 | SAMN05192578_101542 | SAMN05192578_1011036 | Putative collagen-binding domain of a collagenase. | Hypothetical protein. | 0.753 |
SDK96191.1 | SDL31846.1 | SAMN05192578_101542 | SAMN05192578_102419 | Putative collagen-binding domain of a collagenase. | Protein of unknown function, DUF255. | 0.753 |
SDK96191.1 | SDL37110.1 | SAMN05192578_101542 | SAMN05192578_10353 | Putative collagen-binding domain of a collagenase. | alpha-L-rhamnosidase. | 0.458 |
SDK96191.1 | SDL37749.1 | SAMN05192578_101542 | SAMN05192578_10386 | Putative collagen-binding domain of a collagenase. | Hypothetical protein. | 0.753 |
SDK96191.1 | SDL53917.1 | SAMN05192578_101542 | SAMN05192578_104302 | Putative collagen-binding domain of a collagenase. | Starch-binding associating with outer membrane. | 0.464 |
SDK96191.1 | SDL58400.1 | SAMN05192578_101542 | SAMN05192578_10533 | Putative collagen-binding domain of a collagenase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.491 |
SDK96191.1 | SDL58529.1 | SAMN05192578_101542 | SAMN05192578_10539 | Putative collagen-binding domain of a collagenase. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.648 |
SDK96191.1 | TrxA_1 | SAMN05192578_101542 | SAMN05192578_107129 | Putative collagen-binding domain of a collagenase. | Thioredoxin-related protein. | 0.753 |
SDK99660.1 | SDK96191.1 | SAMN05192578_101751 | SAMN05192578_101542 | Thioredoxin-like. | Putative collagen-binding domain of a collagenase. | 0.753 |
SDL05089.1 | SDK96191.1 | SAMN05192578_1011036 | SAMN05192578_101542 | Hypothetical protein. | Putative collagen-binding domain of a collagenase. | 0.753 |
SDL31846.1 | SDK96191.1 | SAMN05192578_102419 | SAMN05192578_101542 | Protein of unknown function, DUF255. | Putative collagen-binding domain of a collagenase. | 0.753 |
SDL37110.1 | SDK96191.1 | SAMN05192578_10353 | SAMN05192578_101542 | alpha-L-rhamnosidase. | Putative collagen-binding domain of a collagenase. | 0.458 |
SDL37749.1 | SDK96191.1 | SAMN05192578_10386 | SAMN05192578_101542 | Hypothetical protein. | Putative collagen-binding domain of a collagenase. | 0.753 |
SDL53917.1 | SDK96191.1 | SAMN05192578_104302 | SAMN05192578_101542 | Starch-binding associating with outer membrane. | Putative collagen-binding domain of a collagenase. | 0.464 |
SDL58400.1 | SDK96191.1 | SAMN05192578_10533 | SAMN05192578_101542 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Putative collagen-binding domain of a collagenase. | 0.491 |
SDL58529.1 | NagA_2 | SAMN05192578_10539 | SAMN05192578_10540 | Putative membrane-bound dehydrogenase domain-containing protein. | Predicted dehydrogenase. | 0.917 |
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