STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GlnQphospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
MlaE_1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.999
MlaE_2
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.989
MlaD
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.979
SDL40986.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.962
MetN
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
  
 
0.914
SDL72238.1
ABC-type multidrug transport system, ATPase and permease component.
    
0.824
SDL72108.1
Anti-anti-sigma factor.
   
   0.815
YbhR_1
ABC-2 type transport system permease protein.
      0.727
RlmI_1
23S rRNA (cytosine1962-C5)-methyltransferase.
       0.716
YbhF_1
ABC-type multidrug transport system, ATPase component.
    
0.692
Your Current Organism:
Sphingobacterium mizutaii
NCBI taxonomy Id: 1010
Other names: ATCC 33299, CCUG 15907, CDC group II-I, CIP 101122, DSM 11724, Flavibacterium mizutaii, Flavobacterium mizutaii, IFO 14946, JCM 21155, LMG 8340, LMG:8340, NBRC 14946, NCTC 12149, S. mizutaii, Sphingobacterium mizutae, Sphingobacterium sp. CCUG 15262, Sphingobacterium sp. CDC D3663, Sphingobacterium sp. LMG 8346, strain KC1794
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.