Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LdcA | YkfB | SAMN05192578_103212 | SAMN05192578_103219 | Muramoyltetrapeptide carboxypeptidase. | L-alanine-DL-glutamate epimerase. | 0.433 |
SDL40237.1 | SDL40261.1 | SAMN05192578_103217 | SAMN05192578_103218 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.949 |
SDL40237.1 | YkfB | SAMN05192578_103217 | SAMN05192578_103219 | Starch-binding associating with outer membrane. | L-alanine-DL-glutamate epimerase. | 0.608 |
SDL40237.1 | YkfC | SAMN05192578_103217 | SAMN05192578_103220 | Starch-binding associating with outer membrane. | NlpC/P60 family protein. | 0.537 |
SDL40261.1 | SDL40237.1 | SAMN05192578_103218 | SAMN05192578_103217 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.949 |
SDL40261.1 | YkfB | SAMN05192578_103218 | SAMN05192578_103219 | TonB-linked outer membrane protein, SusC/RagA family. | L-alanine-DL-glutamate epimerase. | 0.646 |
SDL40261.1 | YkfC | SAMN05192578_103218 | SAMN05192578_103220 | TonB-linked outer membrane protein, SusC/RagA family. | NlpC/P60 family protein. | 0.568 |
SDL40325.1 | YkfB | SAMN05192578_103221 | SAMN05192578_103219 | Asparaginase. | L-alanine-DL-glutamate epimerase. | 0.510 |
SDL40325.1 | YkfC | SAMN05192578_103221 | SAMN05192578_103220 | Asparaginase. | NlpC/P60 family protein. | 0.510 |
YkfB | LdcA | SAMN05192578_103219 | SAMN05192578_103212 | L-alanine-DL-glutamate epimerase. | Muramoyltetrapeptide carboxypeptidase. | 0.433 |
YkfB | SDL40237.1 | SAMN05192578_103219 | SAMN05192578_103217 | L-alanine-DL-glutamate epimerase. | Starch-binding associating with outer membrane. | 0.608 |
YkfB | SDL40261.1 | SAMN05192578_103219 | SAMN05192578_103218 | L-alanine-DL-glutamate epimerase. | TonB-linked outer membrane protein, SusC/RagA family. | 0.646 |
YkfB | SDL40325.1 | SAMN05192578_103219 | SAMN05192578_103221 | L-alanine-DL-glutamate epimerase. | Asparaginase. | 0.510 |
YkfB | YkfC | SAMN05192578_103219 | SAMN05192578_103220 | L-alanine-DL-glutamate epimerase. | NlpC/P60 family protein. | 0.907 |
YkfC | SDL40237.1 | SAMN05192578_103220 | SAMN05192578_103217 | NlpC/P60 family protein. | Starch-binding associating with outer membrane. | 0.537 |
YkfC | SDL40261.1 | SAMN05192578_103220 | SAMN05192578_103218 | NlpC/P60 family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.568 |
YkfC | SDL40325.1 | SAMN05192578_103220 | SAMN05192578_103221 | NlpC/P60 family protein. | Asparaginase. | 0.510 |
YkfC | YkfB | SAMN05192578_103220 | SAMN05192578_103219 | NlpC/P60 family protein. | L-alanine-DL-glutamate epimerase. | 0.907 |