STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL37242.1Thioredoxin-like. (157 aa)    
Predicted Functional Partners:
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.909
MsrB
Peptide-methionine (R)-S-oxide reductase.
   
 
 0.909
CirA_2
Outer membrane receptor for ferrienterochelin and colicins.
 
     0.850
SDL37221.1
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA.
       0.598
SDL88252.1
Thioredoxin.
 
 
 0.471
SDL37276.1
Hypothetical protein.
       0.461
panD-2
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.412
Your Current Organism:
Sphingobacterium mizutaii
NCBI taxonomy Id: 1010
Other names: ATCC 33299, CCUG 15907, CDC group II-I, CIP 101122, DSM 11724, Flavibacterium mizutaii, Flavobacterium mizutaii, IFO 14946, JCM 21155, LMG 8340, LMG:8340, NBRC 14946, NCTC 12149, S. mizutaii, Sphingobacterium mizutae, Sphingobacterium sp. CCUG 15262, Sphingobacterium sp. CDC D3663, Sphingobacterium sp. LMG 8346, strain KC1794
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