STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GldHGliding motility-associated lipoprotein GldH. (152 aa)    
Predicted Functional Partners:
DnaX_1
DNA polymerase-3 subunit delta'.
 
     0.847
Tpl_1
Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development).
       0.829
lpxK
lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
       0.773
SDL62294.1
Gliding motility associated protien GldN.
  
   
 0.629
SDL29158.1
Protein of unknown function.
  
     0.623
SDL62321.1
Gliding motility-associated protein GldL.
  
   
 0.604
SDL86500.1
Hypothetical protein.
  
     0.571
SDL62342.1
Gliding motility-associated protein GldM.
  
   
 0.556
SDK98465.1
DNA uptake protein ComE.
  
     0.554
SDL70114.1
pRiA4b ORF-3-like protein.
  
     0.553
Your Current Organism:
Sphingobacterium mizutaii
NCBI taxonomy Id: 1010
Other names: ATCC 33299, CCUG 15907, CDC group II-I, CIP 101122, DSM 11724, Flavibacterium mizutaii, Flavobacterium mizutaii, IFO 14946, JCM 21155, LMG 8340, LMG:8340, NBRC 14946, NCTC 12149, S. mizutaii, Sphingobacterium mizutae, Sphingobacterium sp. CCUG 15262, Sphingobacterium sp. CDC D3663, Sphingobacterium sp. LMG 8346, strain KC1794
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