Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AmaA | SDL61253.1 | SAMN05192578_105178 | SAMN05192578_105174 | Amidohydrolase. | Hypothetical protein. | 0.458 |
AmaA | SDL61307.1 | SAMN05192578_105178 | SAMN05192578_105177 | Amidohydrolase. | Sporulation related domain-containing protein. | 0.819 |
AmaA | SDL61343.1 | SAMN05192578_105178 | SAMN05192578_105179 | Amidohydrolase. | Hypothetical protein. | 0.773 |
AmaA | SDL61362.1 | SAMN05192578_105178 | SAMN05192578_105180 | Amidohydrolase. | N-acetylglutamate synthase, GNAT family. | 0.794 |
AmaA | mqnD | SAMN05192578_105178 | SAMN05192578_105175 | Amidohydrolase. | 1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. | 0.478 |
AmaA | secA | SAMN05192578_105178 | SAMN05192578_105176 | Amidohydrolase. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.825 |
AmaA | surE | SAMN05192578_105178 | SAMN05192578_105173 | Amidohydrolase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.458 |
SDL61253.1 | AmaA | SAMN05192578_105174 | SAMN05192578_105178 | Hypothetical protein. | Amidohydrolase. | 0.458 |
SDL61253.1 | SDL61307.1 | SAMN05192578_105174 | SAMN05192578_105177 | Hypothetical protein. | Sporulation related domain-containing protein. | 0.472 |
SDL61253.1 | SDL61343.1 | SAMN05192578_105174 | SAMN05192578_105179 | Hypothetical protein. | Hypothetical protein. | 0.458 |
SDL61253.1 | SDL61362.1 | SAMN05192578_105174 | SAMN05192578_105180 | Hypothetical protein. | N-acetylglutamate synthase, GNAT family. | 0.458 |
SDL61253.1 | mqnD | SAMN05192578_105174 | SAMN05192578_105175 | Hypothetical protein. | 1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. | 0.737 |
SDL61253.1 | secA | SAMN05192578_105174 | SAMN05192578_105176 | Hypothetical protein. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.472 |
SDL61253.1 | surE | SAMN05192578_105174 | SAMN05192578_105173 | Hypothetical protein. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.799 |
SDL61307.1 | AmaA | SAMN05192578_105177 | SAMN05192578_105178 | Sporulation related domain-containing protein. | Amidohydrolase. | 0.819 |
SDL61307.1 | SDL61253.1 | SAMN05192578_105177 | SAMN05192578_105174 | Sporulation related domain-containing protein. | Hypothetical protein. | 0.472 |
SDL61307.1 | SDL61343.1 | SAMN05192578_105177 | SAMN05192578_105179 | Sporulation related domain-containing protein. | Hypothetical protein. | 0.746 |
SDL61307.1 | SDL61362.1 | SAMN05192578_105177 | SAMN05192578_105180 | Sporulation related domain-containing protein. | N-acetylglutamate synthase, GNAT family. | 0.746 |
SDL61307.1 | mqnD | SAMN05192578_105177 | SAMN05192578_105175 | Sporulation related domain-containing protein. | 1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. | 0.493 |
SDL61307.1 | secA | SAMN05192578_105177 | SAMN05192578_105176 | Sporulation related domain-containing protein. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.837 |
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