STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NagBGlucosamine-6-phosphate deaminase. (639 aa)    
Predicted Functional Partners:
NagA_1
N-acetylglucosamine-6-phosphate deacetylase.
 0.995
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.944
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.935
SDL30152.1
Hypothetical protein.
  
 
 0.925
SDL30338.1
Hypothetical protein.
  
 
 0.925
AlgA_1
Mannose-6-phosphate isomerase, cupin superfamily.
    
 0.915
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
   
 0.699
SDL71681.1
Predicted acyltransferase.
 
    0.667
DnaE_2
DNA polymerase III, alpha subunit.
  
    0.649
DnaE_1
DNA polymerase III, alpha subunit.
  
    0.632
Your Current Organism:
Sphingobacterium mizutaii
NCBI taxonomy Id: 1010
Other names: ATCC 33299, CCUG 15907, CDC group II-I, CIP 101122, DSM 11724, Flavibacterium mizutaii, Flavobacterium mizutaii, IFO 14946, JCM 21155, LMG 8340, LMG:8340, NBRC 14946, NCTC 12149, S. mizutaii, Sphingobacterium mizutae, Sphingobacterium sp. CCUG 15262, Sphingobacterium sp. CDC D3663, Sphingobacterium sp. LMG 8346, strain KC1794
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