Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RibE | RibF | SAMN05192578_1011070 | SAMN05192578_101972 | Riboflavin synthase alpha chain. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.934 |
RibE | SDL58290.1 | SAMN05192578_1011070 | SAMN05192578_10528 | Riboflavin synthase alpha chain. | Calcineurin-like phosphoesterase. | 0.900 |
RibF | RibE | SAMN05192578_101972 | SAMN05192578_1011070 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Riboflavin synthase alpha chain. | 0.934 |
RibF | SDL58290.1 | SAMN05192578_101972 | SAMN05192578_10528 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Calcineurin-like phosphoesterase. | 0.900 |
SDK88330.1 | SDL58267.1 | SAMN05192578_101118 | SAMN05192578_10527 | Family of unknown function. | SdiA-regulated. | 0.464 |
SDK88330.1 | SDL58290.1 | SAMN05192578_101118 | SAMN05192578_10528 | Family of unknown function. | Calcineurin-like phosphoesterase. | 0.878 |
SDK90544.1 | SDL58290.1 | SAMN05192578_101253 | SAMN05192578_10528 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Calcineurin-like phosphoesterase. | 0.476 |
SDL27451.1 | SDL27467.1 | SAMN05192578_102204 | SAMN05192578_102205 | Protein of unknown function. | Protein of unknown function. | 0.958 |
SDL27451.1 | SDL58290.1 | SAMN05192578_102204 | SAMN05192578_10528 | Protein of unknown function. | Calcineurin-like phosphoesterase. | 0.507 |
SDL27467.1 | SDL27451.1 | SAMN05192578_102205 | SAMN05192578_102204 | Protein of unknown function. | Protein of unknown function. | 0.958 |
SDL27467.1 | SDL58290.1 | SAMN05192578_102205 | SAMN05192578_10528 | Protein of unknown function. | Calcineurin-like phosphoesterase. | 0.477 |
SDL31423.1 | SDL54829.1 | SAMN05192578_102398 | SAMN05192578_104342 | Family of unknown function. | Carboxypeptidase regulatory-like domain-containing protein. | 0.481 |
SDL31423.1 | SDL58290.1 | SAMN05192578_102398 | SAMN05192578_10528 | Family of unknown function. | Calcineurin-like phosphoesterase. | 0.832 |
SDL40879.1 | SDL58290.1 | SAMN05192578_103246 | SAMN05192578_10528 | Methyltransferase domain-containing protein. | Calcineurin-like phosphoesterase. | 0.710 |
SDL54829.1 | SDL31423.1 | SAMN05192578_104342 | SAMN05192578_102398 | Carboxypeptidase regulatory-like domain-containing protein. | Family of unknown function. | 0.481 |
SDL54829.1 | SDL58290.1 | SAMN05192578_104342 | SAMN05192578_10528 | Carboxypeptidase regulatory-like domain-containing protein. | Calcineurin-like phosphoesterase. | 0.832 |
SDL58267.1 | SDK88330.1 | SAMN05192578_10527 | SAMN05192578_101118 | SdiA-regulated. | Family of unknown function. | 0.464 |
SDL58267.1 | SDL58290.1 | SAMN05192578_10527 | SAMN05192578_10528 | SdiA-regulated. | Calcineurin-like phosphoesterase. | 0.912 |
SDL58290.1 | RibE | SAMN05192578_10528 | SAMN05192578_1011070 | Calcineurin-like phosphoesterase. | Riboflavin synthase alpha chain. | 0.900 |
SDL58290.1 | RibF | SAMN05192578_10528 | SAMN05192578_101972 | Calcineurin-like phosphoesterase. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.900 |
page 1 of 2