Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ald2 | Alr | SAMN05192578_11068 | SAMN05192578_1011129 | Alanine dehydrogenase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.966 |
Ald2 | CapD_1 | SAMN05192578_11068 | SAMN05192578_11069 | Alanine dehydrogenase. | UDP-glucose 4-epimerase; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | 0.534 |
Ald2 | GltB_1 | SAMN05192578_11068 | SAMN05192578_11532 | Alanine dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.453 |
Ald2 | SDL81336.1 | SAMN05192578_11068 | SAMN05192578_11067 | Alanine dehydrogenase. | Acetyl esterase/lipase. | 0.773 |
Alr | Ald2 | SAMN05192578_1011129 | SAMN05192578_11068 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Alanine dehydrogenase. | 0.966 |
CapD_1 | Ald2 | SAMN05192578_11069 | SAMN05192578_11068 | UDP-glucose 4-epimerase; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | Alanine dehydrogenase. | 0.534 |
CapD_1 | SDL81336.1 | SAMN05192578_11069 | SAMN05192578_11067 | UDP-glucose 4-epimerase; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | Acetyl esterase/lipase. | 0.533 |
GltB_1 | Ald2 | SAMN05192578_11532 | SAMN05192578_11068 | Glutamate synthase (NADPH/NADH) large chain. | Alanine dehydrogenase. | 0.453 |
SDL81336.1 | Ald2 | SAMN05192578_11067 | SAMN05192578_11068 | Acetyl esterase/lipase. | Alanine dehydrogenase. | 0.773 |
SDL81336.1 | CapD_1 | SAMN05192578_11067 | SAMN05192578_11069 | Acetyl esterase/lipase. | UDP-glucose 4-epimerase; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | 0.533 |