STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL88045.13-hydroxyacyl-CoA dehydrogenase. (808 aa)    
Predicted Functional Partners:
ThlA
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
FadA
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
EchA8
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
0.971
SDL87983.1
Acyl-CoA dehydrogenase.
 
 0.968
FadB_1
3-hydroxyacyl-CoA dehydrogenase.
  
0.956
ScoB
3-oxoacid CoA-transferase subunit B.
  
 0.952
ScoA
3-oxoacid CoA-transferase subunit A.
  
 
 0.947
FadB_2
3-hydroxybutyryl-CoA dehydrogenase.
0.938
LuxQ_4
Signal transduction histidine kinase.
  
 
 0.896
SDL91134.1
Acyl-CoA dehydrogenase.
 
 0.877
Your Current Organism:
Sphingobacterium mizutaii
NCBI taxonomy Id: 1010
Other names: ATCC 33299, CCUG 15907, CDC group II-I, CIP 101122, DSM 11724, Flavibacterium mizutaii, Flavobacterium mizutaii, IFO 14946, JCM 21155, LMG 8340, LMG:8340, NBRC 14946, NCTC 12149, S. mizutaii, Sphingobacterium mizutae, Sphingobacterium sp. CCUG 15262, Sphingobacterium sp. CDC D3663, Sphingobacterium sp. LMG 8346, strain KC1794
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