Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Nlrp4cNLR family, pyrin domain containing 4C. (982 aa)    
Predicted Functional Partners:
Tbk1
TANK-binding kinase 1.
    
 0.797
Ooep
Oocyte expressed protein.
  
 
 
 0.762
Pycard
PYD and CARD domain containing.
    
 0.726
Sugt1
SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae).
    
  0.711
Tle6
Transducin-like enhancer of split 6.
    
 
 0.705
Zbed3
Zinc finger, BED type containing 3.
    
 
 0.702
Padi6
Peptidyl arginine deiminase, type VI.
    
 
 0.702
ENSMSIP00000036005
annotation not available
    
 
 0.696
Tuba4a
Tubulin, alpha 4A.
    
  0.681
Dtx4
Deltex 4, E3 ubiquitin ligase.
    
 0.678
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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