Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000000097annotation not available (305 aa)    
Predicted Functional Partners:
Plau
Plasminogen activator, urokinase.
   
 0.999
Plat
Plasminogen activator, tissue.
   
 0.990
Vtn
Vitronectin.
    
 0.961
Serpine1
Serine (or cysteine) peptidase inhibitor, clade E, member 1.
   
 0.893
Plg
Plasminogen.
    
 0.893
ENSMSIP00000014722
annotation not available
     
  0.868
Serpinb2
Serine (or cysteine) peptidase inhibitor, clade B, member 2.
   
 0.832
Selenbp1
Selenium binding protein 1.
    
 
 0.820
Scaf4
SR-related CTD-associated factor 4.
    
   0.808
ENSMSIP00000007443
annotation not available
    
   0.701
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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