Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Klf5Kruppel-like factor 5. (445 aa)    
Predicted Functional Partners:
Fbxw7
F-box and WD-40 domain protein 7.
    
 
 0.937
ENSMSIP00000034140
annotation not available
    
 0.922
Rara
Retinoic acid receptor, alpha.
    
 0.918
ENSMSIP00000030353
annotation not available
    
 0.894
Wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.894
Pparg
Peroxisome proliferator activated receptor gamma.
    
 0.862
ENSMSIP00000037691
annotation not available
    
 0.850
ENSMSIP00000005634
annotation not available
    
 0.825
Fbxw9
F-box and WD-40 domain protein 9.
    
 
 0.819
Crebbp
CREB binding protein.
    
 0.814
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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