STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec14l1SEC14-like lipid binding 1. (743 aa)    
Predicted Functional Partners:
Sumf1
Sulfatase modifying factor 1.
    
  0.656
ENSMSIP00000009253
annotation not available
    
 
 0.646
Pptc7
PTC7 protein phosphatase homolog.
    
   0.596
Ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.569
ENSMSIP00000026938
annotation not available
      
 0.535
Ccdc28a
Coiled-coil domain containing 28A.
      
 0.535
Ahdc1
AT hook, DNA binding motif, containing 1.
      
 0.527
Tmem159
Transmembrane protein 159.
      
 0.521
ENSMSIP00000033752
annotation not available
      
 0.521
Dusp19
Dual specificity phosphatase 19.
   
  
 0.499
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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