STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mtcl1Microtubule crosslinking factor 1. (1986 aa)    
Predicted Functional Partners:
Pnma1
Paraneoplastic antigen MA1.
      
 0.582
Trim46
Tripartite motif-containing 46.
    
 
 0.568
Megf6
Multiple EGF-like-domains 6.
      
 0.545
Kctd20
Potassium channel tetramerisation domain containing 20.
      
 0.544
Lrrc45
Leucine rich repeat containing 45.
      
 0.541
Pnma2
Paraneoplastic antigen MA2.
      
 0.536
Ywhab
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide.
      
 0.513
Ppp2r5e
Protein phosphatase 2, regulatory subunit B', epsilon.
    
 
 0.492
Efcab12
EF-hand calcium binding domain 12.
      
 0.465
Dock7
Dedicator of cytokinesis 7.
      
 0.440
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.