STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rabgap1RAB GTPase activating protein 1. (1064 aa)    
Predicted Functional Partners:
Hook3
Hook microtubule tethering protein 3.
   
   0.889
Rab6b
RAB6B, member RAS oncogene family.
    
 0.839
Rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.812
ENSMSIP00000009576
annotation not available
    
 0.756
Rab6a
RAB6A, member RAS oncogene family.
    
 0.756
Tuft1
Tuftelin 1.
    
 
 0.653
Rab34
RAB34, member RAS oncogene family.
    
 0.639
Rab36
RAB36, member RAS oncogene family.
    
 0.635
Rnf214
Ring finger protein 214.
   
    0.586
Pak2
P21 (RAC1) activated kinase 2.
   
    0.582
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.