STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nup153Nucleoporin 153. (1464 aa)    
Predicted Functional Partners:
Nup98
Nucleoporin 98.
   
 0.999
Ranbp2
RAN binding protein 2.
   
0.999
Tpr
Translocated promoter region, nuclear basket protein.
   
 0.999
Nup88
Nucleoporin 88.
   
 0.999
Nup85
Nucleoporin 85.
    
 0.999
Nup214
Nucleoporin 214.
   
 0.998
Nup43
Nucleoporin 43.
    
 0.998
Nup93
Nucleoporin 93.
    
 0.997
Nup35
Nucleoporin 35.
    
 0.997
Nup133
Nucleoporin 133.
   
 0.995
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.