Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PlekPleckstrin. (353 aa)    
Predicted Functional Partners:
ENSMSIP00000013581
annotation not available
      
 0.872
Fermt3
Fermitin family member 3.
   
  
 0.817
ENSMSIP00000005339
annotation not available
   
  
 0.731
Btk
Bruton agammaglobulinemia tyrosine kinase.
   
  
 0.711
ENSMSIP00000016465
annotation not available
     
 0.705
Inppl1
Inositol polyphosphate phosphatase-like 1.
   
 
 0.704
Osbp
Oxysterol binding protein.
      
 0.667
Plcd1
Phospholipase C, delta 1.
      
 0.642
Cnn1
Calponin 1.
     
 0.640
Cyth1
Cytohesin 1.
   
  
 0.627
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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