Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001045annotation not available (130 aa)    
Predicted Functional Partners:
Cul3
Cullin 3.
    
 0.954
Cul1
Cullin 1.
    
 0.829
Klhl28
Kelch-like 28.
    
  0.802
Klhl13
Kelch-like 13.
    
 0.730
Klhl31
Kelch-like 31.
    
 0.730
Klhl26
Kelch-like 26.
    
 0.730
Rbx1
Ring-box 1.
    
 0.696
Ubxn7
UBX domain protein 7.
    
 0.643
Nedd8
Neural precursor cell expressed, developmentally down-regulated gene 8.
    
 0.640
Commd9
COMM domain containing 9.
     
  0.608
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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