Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dmrtc1aDMRT-like family C1a. (225 aa)    
Predicted Functional Partners:
Kptn
Kaptin.
    
 0.716
Depdc5
DEP domain containing 5.
    
 0.690
Wdr59
WD repeat domain 59.
    
 0.686
Nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.630
Il4
Interleukin 4.
  
  
  0.601
Wdr24
WD repeat domain 24.
    
 0.595
ENSMSIP00000026678
annotation not available
    
 0.595
Nprl3
Nitrogen permease regulator-like 3.
    
 0.567
Mios
Meiosis regulator for oocyte development.
     
 0.528
Immp1l
IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae).
    
 0.521
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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