STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dmrtc1aDMRT-like family C1a. (225 aa)    
Predicted Functional Partners:
Kptn
Kaptin.
    
 0.844
Depdc5
DEP domain containing 5.
    
 0.805
Wdr59
WD repeat domain 59.
    
 0.800
Nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.788
Wdr24
WD repeat domain 24.
    
 0.654
ENSMSIP00000026678
annotation not available
    
 0.654
Il4
Interleukin 4.
  
  
  0.614
Nprl3
Nitrogen permease regulator-like 3.
     
 0.613
Ubn2
Ubinuclein 2.
      
 0.613
Immp1l
IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae).
    
 0.610
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.