Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fbxo48F-box protein 48. (161 aa)    
Predicted Functional Partners:
Fbxo47
F-box protein 47.
      
 0.878
Phf12
PHD finger protein 12.
      
 0.872
Skp1a
S-phase kinase-associated protein 1A.
    
 
 0.780
Lin54
Lin-54 homolog (C. elegans).
      
 0.723
Ect2l
Epithelial cell transforming sequence 2 oncogene-like.
      
 0.714
ENSMSIP00000000847
annotation not available
    
 
 0.567
Cnrip1
Cannabinoid receptor interacting protein 1.
      
 0.556
Fbxl22
F-box and leucine-rich repeat protein 22.
      
 0.547
E2f7
E2F transcription factor 7.
      
 0.546
ENSMSIP00000006901
annotation not available
      
 0.538
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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