Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001088annotation not available (136 aa)    
Predicted Functional Partners:
Psat1
Phosphoserine aminotransferase 1.
  
 0.972
Psph
Phosphoserine phosphatase.
  
 0.786
ENSMSIP00000018380
annotation not available
    
 0.782
Epn3
Epsin 3.
    
   0.773
Pgam2
Phosphoglycerate mutase 2.
    
 0.769
Bpgm
2,3-bisphosphoglycerate mutase.
    
 0.769
Agxt
Alanine-glyoxylate aminotransferase.
  
 
 0.764
Gldc
Glycine decarboxylase.
  
 
 0.739
Shmt1
Serine hydroxymethyltransferase 1 (soluble).
  
 
 0.718
Amt
Aminomethyltransferase.
  
 0.715
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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