Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Celsr3Cadherin, EGF LAG seven-pass G-type receptor 3. (3309 aa)    
Predicted Functional Partners:
Vangl2
VANGL planar cell polarity 2.
    
 0.874
Efnb3
Ephrin B3.
      
 0.872
Pcdh20
Protocadherin 20.
   
  0.806
Fzd3
Frizzled class receptor 3.
    
 0.740
Emx1
Empty spiracles homeobox 1.
   
  
 0.737
Cacna1c
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
      
 0.715
Prickle1
Prickle planar cell polarity protein 1.
   
 0.675
ENSMSIP00000038105
annotation not available
   
 0.621
ENSMSIP00000020700
annotation not available
      
 0.604
Fzd6
Frizzled class receptor 6.
    
 0.600
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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