STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001094annotation not available (167 aa)    
Predicted Functional Partners:
Rabggtb
Rab geranylgeranyl transferase, b subunit.
    
  0.942
ENSMSIP00000005201
annotation not available
    
 
 0.894
Cnnm2
Cyclin M2.
    
 
 0.813
ENSMSIP00000010880
annotation not available
     
 0.792
Csde1
Cold shock domain containing E1, RNA binding.
   
   0.786
ENSMSIP00000024112
annotation not available
   
    0.604
Taf6
TATA-box binding protein associated factor 6.
     
 0.585
Taf6l
TATA-box binding protein associated factor 6 like.
     
 0.565
Cnnm4
Cyclin M4.
    
 
 0.481
Pts
6-pyruvoyl-tetrahydropterin synthase.
      
 0.444
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.