Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Zfp398Zinc finger protein 398. (643 aa)    
Predicted Functional Partners:
Zfp282
Zinc finger protein 282.
    
   0.954
Elmo1
Engulfment and cell motility 1.
    
 
 0.953
Zfp212
Zinc finger protein 212.
    
   0.944
Zfp746
Zinc finger protein 746.
    
 
 0.934
Zfp777
Zinc finger protein 777.
    
   0.840
ENSMSIP00000010676
annotation not available
   
   0.794
ENSMSIP00000005017
annotation not available
   
  0.763
ENSMSIP00000031034
annotation not available
   
  0.763
Ak9
Adenylate kinase 9.
    
  0.694
Pcmt1
protein-L-isoaspartate (D-aspartate) O-methyltransferase 1.
      
 0.561
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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