STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001099annotation not available (2262 aa)    
Predicted Functional Partners:
Svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.930
Itga2
Integrin alpha 2.
    
 0.886
Itga9
Integrin alpha 9.
    
 0.885
Itgav
Integrin alpha V.
    
 0.885
Itga8
Integrin alpha 8.
    
 0.885
Itga11
Integrin alpha 11.
    
 0.884
Itga6
Integrin alpha 6.
    
 0.884
Itga5
Integrin alpha 5 (fibronectin receptor alpha).
    
 0.884
Itga3
Integrin alpha 3.
    
 0.884
Itga10
Integrin, alpha 10.
    
 0.884
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.