STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001099annotation not available (2262 aa)    
Predicted Functional Partners:
Itga9
Integrin alpha 9.
    
 0.876
Col22a1
Collagen, type XXII, alpha 1.
    
 0.876
F12
Coagulation factor XII (Hageman factor).
    
 0.875
Hgfac
Hepatocyte growth factor activator.
    
 0.875
Habp2
Hyaluronic acid binding protein 2.
    
 0.875
Itga8
Integrin alpha 8.
    
 0.874
Itgav
Integrin alpha V.
    
 0.873
Itgb3
Integrin beta 3.
    
0.870
Svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.869
Tnn
Tenascin N.
     
0.867
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.