Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001117annotation not available (689 aa)    
Predicted Functional Partners:
Nbr1
NBR1, autophagy cargo receptor.
    
 0.727
Wdr90
WD repeat domain 90.
   
 0.678
Nme8
NME/NM23 family member 8.
   
   0.676
Wdfy4
WD repeat and FYVE domain containing 4.
    
  0.655
Mdh2
Malate dehydrogenase 2, NAD (mitochondrial).
    
 0.517
Traf7
TNF receptor-associated factor 7.
    
  0.477
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.475
Ckap5
Cytoskeleton associated protein 5.
    
 0.473
Tonsl
Tonsoku-like, DNA repair protein.
    
 0.446
Urb2
URB2 ribosome biogenesis 2 homolog (S. cerevisiae).
    
 0.433
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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