Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpgs1Tubulin polyglutamylase complex subunit 1. (303 aa)    
Predicted Functional Partners:
Lrrc49
Leucine rich repeat containing 49.
    
 0.990
Nicn1
Nicolin 1.
    
 0.988
Ttll1
Tubulin tyrosine ligase-like 1.
    
 0.986
ENSMSIP00000024487
annotation not available
    
 
 0.978
ENSMSIP00000026577
annotation not available
    
 0.946
ENSMSIP00000036209
annotation not available
    
 0.946
Eif3f
Eukaryotic translation initiation factor 3, subunit F.
    
   0.893
ENSMSIP00000024526
annotation not available
    
 
 0.882
Ttl
Tubulin tyrosine ligase.
    
 0.874
Tbc1d19
TBC1 domain family, member 19.
    
   0.865
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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