STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpgs1Tubulin polyglutamylase complex subunit 1. (303 aa)    
Predicted Functional Partners:
Lrrc49
Leucine rich repeat containing 49.
    
 0.964
Ttll1
Tubulin tyrosine ligase-like 1.
    
 0.936
Nicn1
Nicolin 1.
    
 0.935
Ttl
Tubulin tyrosine ligase.
    
 0.840
ENSMSIP00000026577
annotation not available
    
 0.782
ENSMSIP00000036209
annotation not available
    
 0.782
ENSMSIP00000003476
annotation not available
      
 0.618
ENSMSIP00000012532
annotation not available
      
 0.618
Sspo
SCO-spondin.
      
 0.602
Ttll5
Tubulin tyrosine ligase-like family, member 5.
    
 0.583
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.