Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Zfp282Zinc finger protein 282. (666 aa)    
Predicted Functional Partners:
Zfp398
Zinc finger protein 398.
    
   0.954
Zfp212
Zinc finger protein 212.
   
   0.944
Zfp746
Zinc finger protein 746.
   
 
 0.884
Fgl2
Fibrinogen-like protein 2.
    
  0.826
Zfp777
Zinc finger protein 777.
   
 
 0.812
Bahd1
Bromo adjacent homology domain containing 1.
   
   0.812
Trim28
Tripartite motif-containing 28.
    
 0.751
Zfp956
Zinc finger protein 956.
    
 
 0.751
Sf3a3
Splicing factor 3a, subunit 3.
   
   0.716
Ak9
Adenylate kinase 9.
    
  0.694
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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