Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tbc1d8bTBC1 domain family, member 8B. (1114 aa)    
Predicted Functional Partners:
Gapvd1
GTPase activating protein and VPS9 domains 1.
      
 0.868
ENSMSIP00000028271
annotation not available
    
 
 0.796
ENSMSIP00000003905
annotation not available
    
   0.771
Tbc1d9
TBC1 domain family, member 9.
    
   0.771
Tbc1d8
TBC1 domain family, member 8.
    
   0.771
Ankfy1
Ankyrin repeat and FYVE domain containing 1.
      
 0.723
Bloc1s6
Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.
   
 
  0.716
Bysl
Bystin-like.
    
   0.715
Gak
Cyclin G associated kinase.
   
 
  0.684
Rab8b
RAB8B, member RAS oncogene family.
    
 
 0.665
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.