STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Khdrbs1KH domain containing, RNA binding, signal transduction associated 1. (443 aa)    
Predicted Functional Partners:
Ptk6
PTK6 protein tyrosine kinase 6.
    
 0.989
Fyn
Fyn proto-oncogene.
    
 0.986
ENSMSIP00000012414
annotation not available
   
 
 0.973
ENSMSIP00000024372
annotation not available
   
 
 0.973
ENSMSIP00000024648
annotation not available
   
 
 0.973
ENSMSIP00000033569
annotation not available
   
 
 0.973
ENSMSIP00000005351
annotation not available
    
 0.964
Rasa1
RAS p21 protein activator 1.
    
 
 0.964
Dhx9
DEAH (Asp-Glu-Ala-His) box polypeptide 9.
   
 
 0.960
Plcg1
Phospholipase C, gamma 1.
    
 
 0.959
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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