Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Krt16Keratin 16. (469 aa)    
Predicted Functional Partners:
Krt5
Keratin 5.
   
 0.984
Krt10
Keratin 10.
   
  0.963
Krt15
Keratin 15.
   
  0.912
Krt14
Keratin 14.
   
 
  0.910
Krt13
Keratin 13.
   
  0.898
Krt75
Keratin 75.
   
 0.892
Krt42
Keratin 42.
   
  0.871
Krt17
Keratin 17.
   
  0.871
Krt8
Keratin 8.
   
 0.838
Krt12
Keratin 12.
   
 
  0.837
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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