STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krt16Keratin 16. (469 aa)    
Predicted Functional Partners:
Unc79
Unc-79 homolog.
    
 0.906
Krt14
Keratin 14.
  
 
 
0.853
Krt17
Keratin 17.
  
 
 
0.806
Ak9
Adenylate kinase 9.
    
  0.806
Krt42
Keratin 42.
  
 
 
0.795
Krt5
Keratin 5.
  
0.762
Gm5414
Predicted gene 5414.
  
0.745
ENSMSIP00000011381
annotation not available
  
0.739
ENSMSIP00000035691
annotation not available
    
  0.728
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
  0.728
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.