Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Scg5Secretogranin V. (212 aa)    
Predicted Functional Partners:
Pcsk2
Proprotein convertase subtilisin/kexin type 2.
   
 
 0.968
Abcc6
ATP-binding cassette, sub-family C (CFTR/MRP), member 6.
      
 0.863
Apod
Apolipoprotein D.
    
   0.815
Pcsk4
Proprotein convertase subtilisin/kexin type 4.
   
 
 0.785
Pcsk7
Proprotein convertase subtilisin/kexin type 7.
   
 
 0.767
Pcsk5
Proprotein convertase subtilisin/kexin type 5.
   
 
 0.765
Scg3
Secretogranin III.
   
  
 0.755
Mbtps1
Membrane-bound transcription factor peptidase, site 1.
   
 
 0.723
Serpinf2
Serine (or cysteine) peptidase inhibitor, clade F, member 2.
      
 0.720
Pcsk6
Proprotein convertase subtilisin/kexin type 6.
   
 
 0.694
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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