STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scg5Secretogranin V. (212 aa)    
Predicted Functional Partners:
Pcsk2
Proprotein convertase subtilisin/kexin type 2.
   
 
 0.950
Chgb
Chromogranin B.
   
  
 0.669
Pcsk4
Proprotein convertase subtilisin/kexin type 4.
   
 
 0.638
Pam
Peptidylglycine alpha-amidating monooxygenase.
   
  
 0.632
Pcsk5
Proprotein convertase subtilisin/kexin type 5.
   
 
 0.629
Pcsk7
Proprotein convertase subtilisin/kexin type 7.
   
 
 0.629
Scg2
Secretogranin II.
   
  
 0.623
Scg3
Secretogranin III.
   
  
 0.623
Pcsk1n
Proprotein convertase subtilisin/kexin type 1 inhibitor.
   
  
 0.615
Mbtps1
Membrane-bound transcription factor peptidase, site 1.
   
 
 0.591
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.