Tube1 protein (Mus spicilegus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

Tube1

Tubulin, epsilon 1. (475 aa)

Predicted Functional Partners:

Tubd1

0.907

Wdr90

0.886

ENSMSIP00000012881

0.868

ENSMSIP00000025901

0.868

Tedc2

0.862

Mad2l1

0.841

Kif11

0.836

Ckap5

0.828

Tcp1

0.811

Nme8

0.809

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ckap5	Kif11	ENSMSIP00000024378	ENSMSIP00000028594	Cytoskeleton associated protein 5.	Kinesin family member 11.	0.649
Ckap5	Mad2l1	ENSMSIP00000024378	ENSMSIP00000004133	Cytoskeleton associated protein 5.	MAD2 mitotic arrest deficient-like 1.	0.960
Ckap5	Tubd1	ENSMSIP00000024378	ENSMSIP00000011369	Cytoskeleton associated protein 5.	Tubulin, delta 1.	0.527
Ckap5	Tube1	ENSMSIP00000024378	ENSMSIP00000001185	Cytoskeleton associated protein 5.	Tubulin, epsilon 1.	0.828
ENSMSIP00000012881	ENSMSIP00000025901	ENSMSIP00000012881	ENSMSIP00000025901	annotation not available	annotation not available	0.960
ENSMSIP00000012881	Tube1	ENSMSIP00000012881	ENSMSIP00000001185	annotation not available	Tubulin, epsilon 1.	0.868
ENSMSIP00000012881	Wdr90	ENSMSIP00000012881	ENSMSIP00000015468	annotation not available	WD repeat domain 90.	0.428
ENSMSIP00000025901	ENSMSIP00000012881	ENSMSIP00000025901	ENSMSIP00000012881	annotation not available	annotation not available	0.960
ENSMSIP00000025901	Tube1	ENSMSIP00000025901	ENSMSIP00000001185	annotation not available	Tubulin, epsilon 1.	0.868
ENSMSIP00000025901	Wdr90	ENSMSIP00000025901	ENSMSIP00000015468	annotation not available	WD repeat domain 90.	0.428
Kif11	Ckap5	ENSMSIP00000028594	ENSMSIP00000024378	Kinesin family member 11.	Cytoskeleton associated protein 5.	0.649
Kif11	Mad2l1	ENSMSIP00000028594	ENSMSIP00000004133	Kinesin family member 11.	MAD2 mitotic arrest deficient-like 1.	0.990
Kif11	Tube1	ENSMSIP00000028594	ENSMSIP00000001185	Kinesin family member 11.	Tubulin, epsilon 1.	0.836
Mad2l1	Ckap5	ENSMSIP00000004133	ENSMSIP00000024378	MAD2 mitotic arrest deficient-like 1.	Cytoskeleton associated protein 5.	0.960
Mad2l1	Kif11	ENSMSIP00000004133	ENSMSIP00000028594	MAD2 mitotic arrest deficient-like 1.	Kinesin family member 11.	0.990
Mad2l1	Tubd1	ENSMSIP00000004133	ENSMSIP00000011369	MAD2 mitotic arrest deficient-like 1.	Tubulin, delta 1.	0.786
Mad2l1	Tube1	ENSMSIP00000004133	ENSMSIP00000001185	MAD2 mitotic arrest deficient-like 1.	Tubulin, epsilon 1.	0.841
Nme8	Tubd1	ENSMSIP00000021465	ENSMSIP00000011369	NME/NM23 family member 8.	Tubulin, delta 1.	0.486
Nme8	Tube1	ENSMSIP00000021465	ENSMSIP00000001185	NME/NM23 family member 8.	Tubulin, epsilon 1.	0.809
Nme8	Wdr90	ENSMSIP00000021465	ENSMSIP00000015468	NME/NM23 family member 8.	WD repeat domain 90.	0.857