STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001188annotation not available (226 aa)    
Predicted Functional Partners:
Lynx1
Ly6/neurotoxin 1.
      
 0.612
Chrna7
Cholinergic receptor, nicotinic, alpha polypeptide 7.
    
 
 0.608
Plk5
Polo like kinase 5.
      
 0.600
Cacna1g
Calcium channel, voltage-dependent, T type, alpha 1G subunit.
      
 0.600
Ly6h
Lymphocyte antigen 6 complex, locus H.
      
 0.564
Lypd6b
LY6/PLAUR domain containing 6B.
   
  
 0.547
Gpr39
G protein-coupled receptor 39.
      
 0.528
Nxph1
Neurexophilin 1.
      
 0.522
Slurp1
Secreted Ly6/Plaur domain containing 1.
      
 0.517
Tfcp2l1
Transcription factor CP2-like 1.
      
 0.482
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.