Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cdc34Cell division cycle 34. (235 aa)    
Predicted Functional Partners:
ENSMSIP00000006713
annotation not available
   
 0.982
Cul1
Cullin 1.
    
 0.979
ENSMSIP00000007187
annotation not available
   
  0.973
Btrc
Beta-transducin repeat containing protein.
    
 0.968
Rbx1
Ring-box 1.
   
 0.965
Skp1a
S-phase kinase-associated protein 1A.
    
 0.953
Fbxw11
F-box and WD-40 domain protein 11.
    
 0.941
Fbxw7
F-box and WD-40 domain protein 7.
    
 0.938
ENSMSIP00000020569
annotation not available
    
 0.928
ENSMSIP00000003263
annotation not available
    
  0.921
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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