Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Zfp212Zinc finger protein 212. (501 aa)    
Predicted Functional Partners:
Zfp746
Zinc finger protein 746.
   
 
 0.953
Zfp398
Zinc finger protein 398.
    
   0.944
Zfp282
Zinc finger protein 282.
   
   0.944
Zfp777
Zinc finger protein 777.
   
   0.911
Sf3a3
Splicing factor 3a, subunit 3.
   
   0.822
Gnb2
Guanine nucleotide binding protein (G protein), beta 2.
    
  0.816
Erp44
Endoplasmic reticulum protein 44.
    
   0.771
Trim28
Tripartite motif-containing 28.
    
 0.751
Zfp956
Zinc finger protein 956.
    
   0.751
Fgl2
Fibrinogen-like protein 2.
    
  0.719
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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