Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mbd6methyl-CpG binding domain protein 6. (1005 aa)    
Predicted Functional Partners:
Mbd5
methyl-CpG binding domain protein 5.
     
 0.857
Ak9
Adenylate kinase 9.
    
 0.805
Unc79
Unc-79 homolog.
    
 0.762
Kdm1b
Lysine (K)-specific demethylase 1B.
    
 0.621
Rims2
Regulating synaptic membrane exocytosis 2.
    
  0.616
Bap1
Brca1 associated protein 1.
    
 0.607
ENSMSIP00000033938
annotation not available
    
  0.585
ENSMSIP00000036092
annotation not available
    
  0.585
Asxl1
Additional sex combs like 1.
    
  0.556
Ranbp2
RAN binding protein 2.
    
 0.553
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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