Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001202annotation not available (249 aa)    
Predicted Functional Partners:
Thoc5
THO complex 5.
   
 0.965
Fyttd1
Forty-two-three domain containing 1.
   
 0.963
Poldip3
Polymerase (DNA-directed), delta interacting protein 3.
   
 0.950
Thoc1
THO complex 1.
    
 0.948
Sarnp
SAP domain containing ribonucleoprotein.
   
 0.946
Alyref
Aly/REF export factor.
   
 0.946
Ddx39
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39.
   
 0.946
Alyref2
Aly/REF export factor 2.
   
 0.946
ENSMSIP00000004714
annotation not available
   
 0.941
ENSMSIP00000036288
annotation not available
   
 0.941
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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