STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rhox12Reproductive homeobox 12. (186 aa)    
Predicted Functional Partners:
ENSMSIP00000016953
annotation not available
      
 0.634
ENSMSIP00000002060
annotation not available
      
 0.596
Kdm6a
Lysine (K)-specific demethylase 6A.
    
 
 0.562
Ldb1
LIM domain binding 1.
    
 0.551
Ldb2
LIM domain binding 2.
    
 0.551
Rsbn1
Rosbin, round spermatid basic protein 1.
      
 0.538
Sel1l2
Sel-1 suppressor of lin-12-like 2 (C. elegans).
    
 
 0.528
Tspyl3
TSPY-like 3.
      
 0.511
Gm9
Predicted gene 9.
      
 0.449
Cplx3
Complexin 3.
     
 0.442
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.