STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vmn1r180Vomeronasal 1 receptor 180. (305 aa)    
Predicted Functional Partners:
Wdr83os
WD repeat domain 83 opposite strand.
      
 0.547
ENSMSIP00000024427
annotation not available
      
 0.547
Vmn2r84
Vomeronasal 2, receptor 84.
      
 0.544
Nudt22
Nudix (nucleoside diphosphate linked moiety X)-type motif 22.
      
 0.526
Helt
Helt bHLH transcription factor.
      
 0.449
Olfr1413
Olfactory receptor 1413.
      
 0.440
Olfr995
Olfactory receptor 995.
      
 0.440
Ppp1r18
Protein phosphatase 1, regulatory subunit 18.
    
 0.427
Tprn
Taperin.
    
 0.427
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.