Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Stmnd1Stathmin domain containing 1. (264 aa)    
Predicted Functional Partners:
Kif13a
Kinesin family member 13A.
      
 0.712
Atxn1l
Ataxin 1-like.
      
 0.709
Ttc22
Tetratricopeptide repeat domain 22.
      
 0.579
Gask1a
Golgi associated kinase 1A.
      
 0.578
E130308A19Rik
RIKEN cDNA E130308A19 gene.
      
 0.552
Riiad1
Regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1.
      
 0.526
Atxn1
Ataxin 1.
      
 0.522
Gna15
Guanine nucleotide binding protein, alpha 15.
      
 0.490
Tmem150c
Transmembrane protein 150C.
      
 0.488
Trib2
Tribbles pseudokinase 2.
      
 0.484
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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