STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccnl1Cyclin L1. (531 aa)    
Predicted Functional Partners:
ENSMSIP00000011770
annotation not available
     
 0.923
Nelfe
Negative elongation factor complex member E, Rdbp.
     
 0.913
Cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component.
     
 0.908
Rb1
RB transcriptional corepressor 1.
     
 0.900
Ssrp1
Structure specific recognition protein 1.
     
 0.898
ENSMSIP00000035691
annotation not available
   
 
 0.898
Leo1
Leo1, Paf1/RNA polymerase II complex component.
   
 
 0.898
Ccnt1
Cyclin T1.
   
 
0.885
Wdr61
WD repeat domain 61.
     
 0.885
Ccnt2
Cyclin T2.
   
 
0.880
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.