Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001229annotation not available (104 aa)    
Predicted Functional Partners:
ENSMSIP00000014170
annotation not available
  
 
 0.942
Hspd1
Heat shock protein 1 (chaperonin).
  
 
 0.942
ENSMSIP00000027893
annotation not available
  
 
 0.942
ENSMSIP00000032211
annotation not available
  
 
 0.942
Mdh2
Malate dehydrogenase 2, NAD (mitochondrial).
   
 
 0.919
Hspa9
Heat shock protein 9.
  
 
 0.905
Grpel1
GrpE-like 1, mitochondrial.
  
 
 0.864
Grpel2
GrpE-like 2, mitochondrial.
  
 
 0.820
Ethe1
Ethylmalonic encephalopathy 1.
    
 
 0.775
Clpp
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
  
 
 0.772
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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