STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GzmmGranzyme M (lymphocyte met-ase 1). (264 aa)    
Predicted Functional Partners:
Met
Met proto-oncogene.
    
  0.809
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
    
  0.809
Ctsc
Cathepsin C.
   
 
 0.655
Wdr90
WD repeat domain 90.
    
 
 0.628
Prf1
Perforin 1 (pore forming protein).
   
 0.609
Agt
Angiotensinogen (serpin peptidase inhibitor, clade A, member 8).
    
 0.603
Serpinb9
Serine (or cysteine) peptidase inhibitor, clade B, member 9.
    
 0.588
Serpinb9b
Serine (or cysteine) peptidase inhibitor, clade B, member 9b.
    
 0.588
Kitl
Kit ligand.
     
 0.572
Ighg1
Immunoglobulin heavy constant gamma 1 (G1m marker).
    
   0.569
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.