STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sipa1Signal-induced proliferation associated gene 1. (1038 aa)    
Predicted Functional Partners:
Afdn
Afadin, adherens junction formation factor.
    
 0.946
Rap1b
RAS related protein 1b.
    
 0.938
Rap1a
RAS-related protein 1a.
    
 0.902
ENSMSIP00000016375
annotation not available
    
 0.902
Rrp1b
Ribosomal RNA processing 1 homolog B (S. cerevisiae).
    
 
 0.672
Rap2a
RAS related protein 2a.
    
 0.640
ENSMSIP00000006457
annotation not available
    
 
 0.639
Snx32
Sorting nexin 32.
      
 0.613
Gm266
Predicted gene 266.
    
 0.588
Rap2b
RAP2B, member of RAS oncogene family.
    
 0.588
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.