Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001244annotation not available (100 aa)    
Predicted Functional Partners:
ENSMSIP00000018596
annotation not available
   
 0.990
Sec63
SEC63-like (S. cerevisiae).
    
 
 0.955
Sec61a1
Sec61 alpha 1 subunit (S. cerevisiae).
   
 0.928
Sec61a2
Sec61, alpha subunit 2 (S. cerevisiae).
   
 0.928
Ssr3
Signal sequence receptor, gamma.
   
 0.926
Sec62
SEC62 homolog (S. cerevisiae).
   
 
 0.833
Rps5
Ribosomal protein S5.
  
   0.831
ENSMSIP00000025814
annotation not available
   
  0.829
Rpl8
Ribosomal protein L8.
   
   0.829
Serp1
Stress-associated endoplasmic reticulum protein 1.
   
  0.829
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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