Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000001249annotation not available (419 aa)    
Predicted Functional Partners:
Nup153
Nucleoporin 153.
   
 0.982
Nup107
Nucleoporin 107.
   
 0.962
Nup43
Nucleoporin 43.
   
 0.958
Nup133
Nucleoporin 133.
   
 0.945
Nup85
Nucleoporin 85.
   
 0.945
Nup160
Nucleoporin 160.
    
 0.923
Kpnb1
Karyopherin (importin) beta 1.
    
 0.919
Kpna1
Karyopherin (importin) alpha 1.
   
 
 0.909
Brd7
Bromodomain containing 7.
    
 
 0.906
Arid2
AT rich interactive domain 2 (ARID, RFX-like).
   
   0.890
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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