STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem89Transmembrane protein 89. (169 aa)    
Predicted Functional Partners:
Rgs22
Regulator of G-protein signalling 22.
   
    0.691
ENSMSIP00000028111
annotation not available
      
 0.574
ENSMSIP00000022484
annotation not available
      
 0.571
ENSMSIP00000005598
annotation not available
   
    0.512
Actrt3
Actin related protein T3.
   
  
 0.512
ENSMSIP00000023430
annotation not available
  
     0.510
Sfta2
Surfactant associated 2.
  
     0.486
C4b
Complement component 4B (Chido blood group).
    
   0.485
C3
Complement component 3.
    
   0.485
Nme8
NME/NM23 family member 8.
      
 0.465
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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